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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015897439.1_cds_XP_016448154.1_42840
CDS Infomation

[gene=LOC107773226] [db_xref=GeneID:107773226] [protein=betaine aldehyde dehydrogenase, chloroplastic-like] [protein_id=XP_016448154.1] [location=join(28288..28405,28741..28874,29325..29405,29491..29639,30693..30785,30867..30990,31095..31160,31255..31324,31664..31740,32792..32905,34792..34869,34954..35105,35188..35248,35352..35458,35778..35868)] [gbkey=CDS]
Sequence

ATGGCAATTCCCAATATGCGGATCCCTAGTCGGCAGCTGTTCATCGACGGTGAATGGAGA
GAACCCGTCAAGAAGAACCGGTTACCCGTCATTAATCCTGCCACTGAAGAAATCATCGGG
GATATTCCGGCATCTACAGCGGAGGATGTAGATATCGCCGTCAAAGCTGCACGGAGAGCG
CTTGGTCGAAATGACTGGGGTTCTACAACTGGAGCACAGCGCGCTAAGTATCTTCGTGCT
ATTGCTGCTAAGGTACTGGAGAAGAGGCCTGAACTTGCTACACTTGAGACAATTGATAAT
GGAAAACCCTGGTTCGAGGCTGCCTCTGATATTGATGATGTCGTAGCGTGCTTTGAGTAC
TATGCAGACCTCGCTGAAGCTTTGGATTCAAAAAGCAAGACTGAAGTTAAACTTCATCTG
GATTCATTCAAGACCCATGTTTATAAAGAGCCTCTTGGTGTTGTGGGGTTAATTACTCCA
TGGAATTATCCTCTGCTGATGACCACATGGAAAGTCGCTCCCGCCCTAGCTGCTGGTTGT
GCAGCAGTACTTAAGCCGTCTGAACTTGCGTCTATTACCTCTTTGGAGTTGGGTGAAATC
TGTAGAGAGGTGGGTCTACCTCCTGGTGCCCTTAACATACTAACGGGATTGGGACATGAA
GCTGGTTCTCCTTTGGTATCGCATCCTGATGTTGATAAGATTGCCTTTACAGGAAGTGGC
CCAACTGGGATCAAGATCATGACCGCTGCAGCTCAACTAGTTAAACCAGTTACACTTGAG
CTTGGTGGAAAAAGTCCACTAGTGGTGTTTGATGACATTCCTAACATTGATATAGCTGTT
GAGTGGACACTTTTTGGCTGCTTTTGGACAAACGGTCAAATTTGCAGTGCAACATCACGT
CTTATAATACAGGATACAATTGCTTCACAATTTTTGGACAGGCTTCTAGAGTGGACGAAA
AACATCAAAATCTCTGATCCCTTGGAAGAAGACTGCAAGCTTGGTCCTGTCATTAGTCGT
GGACAGTATGAGAAGGTCTTGAAGCTCATCTCAACAGCCAAAAATGAAGGTGCAACCATT
CTTTATGGTGGCGAACGGCCTCAGCACTTAAAGAAAGGATATTATATTCAACCGACAATC
ATAACTGATGTGGATACGTCCATGGAAATCTGGAAAGAGGAGGTATTTGGACCTGTTCTT
TGTGTCAAAACATTTAAAACTGAAGAGGAAGCCATTGAACTAGCAAATGATACCAAGTAT
GGTTTGGGTGCTGCTATTTTGTCAAAAGATCTTGAAAGGTGTGAGCGTTTCACAAAGGCT
TTTCAGTCGGGGATTGTCTGGATCAACTGTTCACAGCCATGCTTTTGGCAACCTCCATGG
GGTGGCAAAAAACGTAGTGGTTTTGGACGCGAACTTGGGGAATGGAGTCTTGAGAACTAC
CTAAACATTAAGCAAGTGACTCAGTATGTGTCTGACGAACCATGGGCTTTTTACAAGTCA
CCTTCAAAGCTGTGA

Peptide Sequence

PEP ID

XP_016448154.1
PEP Infomation

PREDICTED: betaine aldehyde dehydrogenase, chloroplastic-like [Nicotiana tabacum]
Sequence

MAIPNMRIPSRQLFIDGEWREPVKKNRLPVINPATEEIIGDIPASTAEDVDIAVKAARRA
LGRNDWGSTTGAQRAKYLRAIAAKVLEKRPELATLETIDNGKPWFEAASDIDDVVACFEY
YADLAEALDSKSKTEVKLHLDSFKTHVYKEPLGVVGLITPWNYPLLMTTWKVAPALAAGC
AAVLKPSELASITSLELGEICREVGLPPGALNILTGLGHEAGSPLVSHPDVDKIAFTGSG
PTGIKIMTAAAQLVKPVTLELGGKSPLVVFDDIPNIDIAVEWTLFGCFWTNGQICSATSR
LIIQDTIASQFLDRLLEWTKNIKISDPLEEDCKLGPVISRGQYEKVLKLISTAKNEGATI
LYGGERPQHLKKGYYIQPTIITDVDTSMEIWKEEVFGPVLCVKTFKTEEEAIELANDTKY
GLGAAILSKDLERCERFTKAFQSGIVWINCSQPCFWQPPWGGKKRSGFGRELGEWSLENY
LNIKQVTQYVSDEPWAFYKSPSKL

Transcript Sequence

Gene sequence data has not been registered.